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January 11, 2006
In This Issue
  • Working Memory Circuit Proposed
  • Alternative HIV Vaccine Proposed
  • Enzyme Demethylates Histones
  • MIRIAM Makes Models More Accessible
  • Drug-in-a-Box?
  • TODAY’S FEATURE: Microwaves Make Combichem Really Cook
  • CHECK IT OUT! Focus on Alliances

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    Working Memory Circuit Proposed
    Researchers at Brandeis University, Waltham, Mass., say they have created a computational model of the brain’s working memory that can be used to understand the effects of drugs that modulate cognition. Full Article

    Alternative HIV Vaccine Proposed
    Researchers at Baylor College of Medicine, Houston, believe that inhibiting a molecule called suppressor of cytokine signaling-1 could lead to a new approach to creating a vaccine against HIV and other chronic infectious pathogens. Full Article
    Enzyme Demethylates Histones
    New published research from the University of North Carolina at Chapel Hill School of Medicine shows that its biochemists demonstrated that covalent histone methylation, which can activate or repress gene function, can be reversed by a specific enzyme. Full Article

    MIRIAM Makes Models More Accessible
    Researchers from 14 international organizations devised a standard to define, exchange, and understand computer-generated biochemical models. Four major biochemical model databases are currently working to meet MIRIAM’s criteria.
    Full Article


    Drug-in-a-Box?
    Scientists at Johns Hopkins University, Baltimore, have developed a tiny metal container that functions as a self-assembling, new encapsulation and delivery device to transport medications and cell therapies to precise areas in the body.
    Full Article

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  • NIST Upgrades Mass Spectra Library

  • The National Institute of Standards and Technology (NIST) announced a major upgrade of the widely used NIST/EPA/NIH Mass Spectral Library. The new edition, NIST 05, brings the number of compounds found in the database to 163,000, and adds two new classes of chemical reference data: a gas-phase "retention index" and a collection of 2,000 tandem mass spectrometry (MS/MS) spectra.

  • Molecule of the Year Named

  • The International Society for Molecular and Cell Biology Protocols and Researches Inc., Iloilo, Philippines, named 4E10, a molecule solved by scientists at The Scripps Research Institute, La Jolla, Calif., as Molecule of the Year 2005 "for being the broadest acting neutralizing antibody against HIV" and "for forming a detailed molecular complex with its specific target thus unraveling clearly its structural-functional configuration."

  • Dow Corning Named Specialty Chemicals Company of 2005

  • Dow Corning Corp., Midland, Mich., was named Specialty Chemicals Company of the Year for 2005 by Frost & Sullivan, New York, because of its innovative practices, customer solutions approach, continued growth, and positive financial results.

  • MIT Receives Pilot Plant Funding

  • The National Institute of Environmental Health Sciences, Research Triangle Park, N.C., has agreed to support several pilot projects at the The MIT Center for Environmental Health Sciences, Cambridge, Mass., including support for Catherine Drennan, associate professor of chemistry, who will focus on "structural studies of the AlkB family of proteins," and Patrick Doyle, assistant professor of chemical engineering, who will study "technologies to rapidly scan single genomic DNA molecules."

  • Can Christmas Trees Become Flu Drug?

  • Biolyse Pharma Corp., St. Catharines, Ontario, Canada, says that shikimic acid, used to make oseltamivir, marketed as Tamiflu, can be found in pine, spruce, and fir needles, which can yield up to 40 grams of the element per kilogram of needles. The company that has the contract to haul away half a million used Christmas trees in the Toronto area, will donate the needles to Biolyse.

  • Synthetic Molecule Generates Neurons

  • Researchers at The Scripps Research Institute and the Salk Institute for Biological Studies, both in La Jolla, Calif., determined that a synthetic molecule, neuropathiazol, can generate functional neurons from adult neural stem cells, which could be used to develop small molecule therapeutics to regenerate neurons in patients with neurodegenerative disorders, such as Alzheimer's or brain injuries.

  • New UK Medicinal Chemistry Training Program Funded

  • Cancer Research UK, London, UK, awarded £10M for a Medicinal Chemistry Training Program that will be funded at five UK universities. The grants will provide funding for 60 PhD studentships in medicinal chemistry over the next five years..

  • Acumen and deCODE Collaborate on Alzheimer’s Research

  • Acumen Pharmaceuticals, South San Francisco and deCODE Chemistry, Woodridge, Ill., are collaborating in a drug discovery program to identify potential treatments for Alzheimer’s Disease. Acumen will identify hits using its its small molecule anti-ADDL platform, while deCODE Chemsitry will conduct lead optimization and provide medicinal chemistry services to Acumen on a fee- for-service basis.

  • ChemAxon to Provide Free Cheminformatics Toolkit

  • ChemAxon Ltd., Budapest, Hungary, will provide its chemical editing, viewing, search, property calculation, and database management toolkits free to accessible web resources operated for non-commercial purposes. In addition, unlimited licenses, upgrades, and support will be provided to increase the quality and capabilities of publicly accessible online chemical research resources.

  • Instrument to Identify Chemicals Being Developed

  • Using condensation nucleation light scattering detection techniques refined at Southern Illinois University Carbondale, Carbondale, Ill., Fluid Measurement Technologies Inc., Vadnais Heights, Minn., and Quant Technologies LLC, Blaine, Minn., are developing an analytical instrument that will be able to detect a few molecules of virtually any chemical. The National Institutes of Health is funding the work and it is expected to be commercially available within two years.





    Microwaves Make Combichem Really Cook
    Microwave-assisted chemistry, which can accelerate chemical reaction times, is an easy, inexpensive technique that’s beginning to heat up combinatorial chemistry. Full Article

    Focus on Alliances
    Full Article


    It's Not Too Late

    You can still register FREE for the archived version of BioDiscovery Expo, an online conference and exhibition held October 26, 2005. Discover exciting talks given by experts in High-Throughput Screening Technologies, High-Content Screening Tools, and Automation and Informatics. The conference features 12 sessions including a video keynote talk by Janet Woodcock, MD, Deputy Commissioner for Operations and Chief Operating Officer, U.S. Food and Drug Administration, who spoke on "Improving the Success of Drug Development: Can We Find Better Predictive Markers?" The BioDiscovery Expo hall showcases the leading tools and technologies used in today's labs. REGISTER TODAY at www.biodiscoveryexpo.com for the archived version of this exciting and unique educational event.
     
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    Archived Webcasts Now Available

    The RNAi Workflow from In Vitro to In Vivo, held December 14, 2005, features three experts discussing the latest solutions for the various phases of RNAi experimentation, from design and validation of RNAi reagents in cell culture to use in vivo in model organisms and, ultimately, as therapeutics. Panelists Mark Kay, MD, PhD, Professor, Departments of Pediatrics and Genetics, Stanford University; Gavin Robertson, PhD, Assistant Professor of Pharmacology, Pathology and Dermatology, Penn State College of Medicine; and Peter Welch, PhD, Director of R&D, Gene Regulation, Invitrogen; discuss diverse applications for state-of-the-art RNAi tools, troubleshooting for RNAi, critical experimental design parameters, downstream analysis and follow-up methods, and more. For more information and to register for the archived Webcast, go to www.dddmag.com/RNAi/

    How Reliable Is Your qPCR Data?, an interactive, streaming audio and video Webcast, held November 15, 2005, features three experts on Quantitative PCR (qPCR), a powerful and sensitive technology for the quantification and validation of genetic data. Panelists Stephen Bustin, PhD, Queen Mary’s School of Medicine and Dentistry, University of London; Maurice Exner, PhD, Infectious Diseases, Quest Diagnostics; and Mark Andersen, PhD, Invitrogen Corp.; discuss the key factors that affect assay performance and lead to data variability, the comparability of qPCR results obtained using different cDNA priming strategies and protocols, the value of multiplexing, and challenges related to normalization of data and experimental conditions, and more. Go to www.dddmag.com/qpcr to register to view the archived version of this Webcast.

    The Quest for an Ideal Multiplexed Protein Profiling Tool, held June 29, 2005 featured a panel of experts discussing what to consider when choosing multiplexed protein profiling technologies, including cost, throughput, standardization, ease of use, data analysis, etc. There are several platforms that have been applied toward answering these challenges, ranging from approaches like 2D gel electrophoresis, 2D-DIGE, mass spec affinity tagging, and multi-dimensional liquid chromatography for protein profiling. The panel, consisting of David W. Speicher, PhD, Professor and Chair, Systems Biology Division, Director, Proteomics Laboratory, The Wistar Institute; David Friedman, PhD, Associate Director, Proteomics Laboratory, Mass Spectrometry Research Center, Vanderbilt University; and Michael Pisano, PhD, President & Co-Founder, Proteome Research Services Inc., considered which of these offers the best capability for comparing and contrasting samples. For more information and to register for the archived Webcast, go to: www.genpromag.com


    LabAutomation's Tenth Anniversary Conference

    LabAutomation 2006, to be held January 21-25, 2006, at the Palm Springs Convention Center in Palm Springs, Calif., brings laboratory automation international business leaders and scientists together with more than 300 exhibits of laboratory technologies. LabAutomation 2006 offers content and perspectives on emerging laboratory technologies from a broad range of industries, including biotechnology, pharmaceutical, forensics, molecular diagnostics, food and agricultural sciences, and others. For more information on the conference and registration, go to labautomation.org/LA/LA06/index.php


    January 2006

    CBI Protein Drugs
    West Conshohocken, Pa. - January 19-20
    View Event Listing


    LabAutomation 2006
    Palm Springs, Calif. - January 21-25, 2006
    View Event Listing


    Drug Delivery Partnerships
    Phoenix, Ariz. - January 25-27
    View Event Listing


    Advances in Protein Crystallography
    San Francisco, Calif. - January 26-27
    View Event Listing


    Pharmaceutical Leadership Summit
    Orlando, Fla. - January 30 - February 1
    View Event Listing


    Medical Design & Manufacturing West
    Anaheim, Calif. - January 30 - February 2
    View Event Listing


    CHI High-Content Analysis 2006
    San Francisco, Calif. - January 31 - February 3
    View Event Listing


    February 2006

    IIR Clinical Trials Congress
    Orlando, Fla. - February 13-15
    View Event Listing


    Screening Europe 2006
    Prague, Czech Republic - February 20-22
    View Event Listing


    MedChem Europe 2006
    Prague, Czech Republic - February 21-22
    View Event Listing


    13th Annual Molecular Medicine Tri-Conference
    San Francisco - February 21-24
    View Event Listing


    Third Annual Technology Transfer Summit for Pharmaceutical and Biotech Industries
    Philadelphia, Pa. - February 27 - March 1
    View Event Listing


    March 2006

    Pittcon: 57th Pittsburgh Conference on Analytical Chemistry and Applied Spectroscopy
    Orlando, Fla. - March 12-17
    View Event Listing


    Transcriptomics, Proteomics and Metabolomics in Dietary Supplement and Nutrition Research
    Kauai, Hawaii - March 20-21
    View Event Listing


    Interphex 2006
    New York - March 21-23
    View Event Listing


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